rfhg_15914.1

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Basic information about the TSS


TSS ID:rfhg_15914.1
Species:human
Chr:chr1
Start:171742179
End:171742195
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2239680,EH38E1397276)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK092254:-38
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-122
    Nearest PromoterID:NM_003762
    Entrez ID:8674
    Nearest Unigene:Hs.6651
    Nearest Refseq:NM_003762
    Nearest Ensembl:ENSG00000117533
    Gene Name:
    Gene Alias:VAMP-4|VAMP24
    Gene Type:protein-coding
    CpG%:0.062500
    GC%:0.470588
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):