rfhg_160000.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_160000.1
Species:human
Chr:chr13
Start:42040553
End:42040634
Strand:+
Source datasetsPRJNA4843412|DRA013844
ProtocolNETCAGE|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2646501,EH38E1671183)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001204504.3:-483
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:557
    Nearest PromoterID:NM_001204504
    Entrez ID:160851
    Nearest Unigene:Hs.630380
    Nearest Refseq:NM_152910
    Nearest Ensembl:ENSG00000102780
    Gene Name:
    Gene Alias:DGKeta
    Gene Type:protein-coding
    CpG%:0.148148
    GC%:0.780488
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):