rfhg_160473.1

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Basic information about the TSS


TSS ID:rfhg_160473.1
Species:human
Chr:chr13
Start:48001388
End:48001418
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2651826,EH38E1674831)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000423869.1:0
BC029610:0
GeneID:101929410
HGNC/MGI_ID:HGNC:39965
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:SUCLA2 antisense RNA 1
    Gene_symbol:SUCLA2-AS1
    Gene_synonyms:
    Gene_source:HGNC:39965



    TATA-Box annotation


    Distance to TSS:-77
    Nearest PromoterID:NM_003850
    Entrez ID:8803
    Nearest Unigene:Hs.743361
    Nearest Refseq:NM_003850
    Nearest Ensembl:ENSG00000136143
    Gene Name:SUCLA2 antisense RNA 1
    Gene Alias:A-BETA|A-SCS|MTDPS5|SCS-betaA
    Gene Type:protein-coding
    CpG%:0.100000
    GC%:0.677419
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.