rfhg_160857.1

Basic information about the TSS

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TSS ID: rfhg_160857.1 Species: human Chr: chr13		Start: 52012382 End: 52012423 Strand: +
Source datasets	PRJNA4843412|DRA013844|PRJDB5282|PRJNA401781|PRJNA548673 |PRJNA615891|PRJNA597322
Protocol	NETCAGE|CAGE|C1CAGE|oligo_capping|RAMPAGE|ReCappable-seq |SLIC_CAGE|STRIPE-seq|TIF-seq2
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	-
Category:	-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000649708.2:0 ENST00000523764.1:0 ENST00000680793.1:0 ENST00000649340.2:0 ENST00000679544.1:0 ENST00000681053.1:0 ENST00000681047.1:0 ENST00000521508.2:0 ENST00000680950.1:0 ENST00000616513.1:0 ENST00000681145.1:0 ENST00000681226.1:0 ENST00000679359.1:0 ENST00000650049.2:0 ENST00000679495.1:0 BC142998:0 AK296747:0 BC108677:0 BC111022:0 AK025456:0 BC143059:0 BC150316:0 GeneID: 440138 HGNC/MGI_ID: HGNC:32456 UniProt_ID: A0A087WYL8 A0A3B3IS90 A0A3B3ISP7 A0A3B3ISU2 Q2TAA5 Q5TAP0 Nearer transcript ids and distances:

Gene_name: ALG11 alpha-1,2-mannosyltransferase Gene_symbol: ALG11 Gene_synonyms: CDG1P KIAA0266 Gene_source: HGNC:32456

TATA-Box annotation

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Distance to TSS:	4
Nearest PromoterID:	NR_036571
Entrez ID:	440138
Nearest Unigene:	Hs.512963
Nearest Refseq:	NM_001004127
Nearest Ensembl:	ENSG00000253710
Gene Name:	ALG11 alpha-1,2-mannosyltransferase
Gene Alias:	CDG1P|GT8
Gene Type:	protein-coding
CpG%:	0.097561
GC%:	0.595238
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.