rfhg_160918.1

Basic information about the TSS

TSS ID:	rfhg_160918.1
Species:	human
Chr:	chr13

Start:	52848633
End:	52848645
Strand:	-

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2656083,EH38E1678036)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000377942.7:0 ENST00000338862.5:0 AF061573:0 BC036025:0 AK297652:0 AK293747:0
GeneID:	5100
HGNC/MGI_ID:	HGNC:8660
UniProt_ID:	A0A024QZ94 B4DEQ8 O95206
Nearer transcript ids and distances:	DQ893339:196 AY013873:197 view more...

Gene_name:	protocadherin 8
Gene_symbol:	PCDH8
Gene_synonyms:	ARCADLIN PAPC
Gene_source:	HGNC:8660

TATA-Box annotation

Distance to TSS:	1
Nearest PromoterID:	NM_032949
Entrez ID:	5100
Nearest Unigene:	Hs.19492
Nearest Refseq:	NM_002590
Nearest Ensembl:	ENSG00000136099
Gene Name:	protocadherin 8
Gene Alias:	ARCADLIN\|PAPC
Gene Type:	protein-coding
CpG%:	0.083333
GC%:	0.692308
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.