rfhg_16117.1

Basic information about the TSS

TSS ID:	rfhg_16117.1
Species:	human
Chr:	chr1

Start:	174022297
End:	174022418
Strand:	-

Source datasets

PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673|PRJNA615891

Protocol

NETCAGE|CAGE|RAMPAGE|ReCappable-seq|SLIC_CAGE

TSS cluster detected^*

7

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2241614,EH38E1398647)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000367696.7:0
GeneID:	149041
HGNC/MGI_ID:	HGNC:29434
UniProt_ID:	Q5TC82
Nearer transcript ids and distances:

Gene_name:	ring finger and CCCH-type domains 1
Gene_symbol:	RC3H1
Gene_synonyms:	KIAA2025 RNF198 RP5-1198E17.5 roquin
Gene_source:	HGNC:29434

TATA-Box annotation

Distance to TSS:	-29285
Nearest PromoterID:	NM_172071
Entrez ID:	149041
Nearest Unigene:	Hs.30258
Nearest Refseq:	NM_172071
Nearest Ensembl:	ENSG00000135870
Gene Name:	ring finger and CCCH-type domains 1
Gene Alias:	RNF198\|ROQUIN
Gene Type:	protein-coding
CpG%:	0.099174
GC%:	0.688525
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.