rfhg_163402.1

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Basic information about the TSS


TSS ID:rfhg_163402.1
TSS ID(Version3):hg_138494.1
Species:human
Chr:chr14
Start:20989965
End:20990037
Strand:+
Source datasetsFANTOM5|DRA000914|PRJNA4843412|DRA013844|PRJDB5282
|PRJNA401781|PRJNA548673|PRJNA615891
ProtocolCAGE|NETCAGE|C1CAGE|oligo_capping|ReCappable-seq|SLIC_CAGE
|RAMPAGE|TIF-seq2
TSS cluster detected*12

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2698073,EH38E1701342)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000554949.1:0
ENST00000555177.5:0
ENST00000554985.5:0
ENST00000554588.5:0
ENST00000382985.8:0
ENST00000339374.11:0
ENST00000556670.6:0
ENST00000555640.6:0
ENST00000555533.6:0
ENST00000557701.5:0
ENST00000556442.1:0
ENST00000553564.5:0
ENST00000557550.6:0
ENST00000554751.5:0
ENST00000554283.1:0
ENST00000553441.5:0
AK304180:0
AK303484:0
AF321002:0
AK024512:0
AK315999:0
BC005053:0
KU178747:0
KU178748:0
KU178749:0
GeneID:64745
HGNC/MGI_ID:HGNC:19280
UniProt_ID:A0A0S2Z5L8 A0A0S2Z5V5 B4E0Q8 B4E298 G3V3X6 G3V4H5 G3V4P2 Q9H7H0
Nearer transcript ids and distances:
  • ENST00000553536.5:6
  • ENST00000555670.1:11
view more...
Gene_name:methyltransferase like 17
Gene_symbol:METTL17
Gene_synonyms:FLJ20859
Gene_source:HGNC:19280



TATA-Box annotation


Distance to TSS:21
Nearest PromoterID:NM_001029991
Entrez ID:64745
Nearest Unigene:Hs.512693
Nearest Refseq:NM_022734
Nearest Ensembl:ENSG00000165792
Gene Name:methyltransferase like 17
Gene Alias:METT11D1
Gene Type:protein-coding
CpG%:0.083333
GC%:0.589041
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.