rfhg_163627.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2698677,EH38E1701791) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -126267 |
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| Nearest PromoterID: | NM_001317107 |
| Entrez ID: | 26687 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001317107 |
| Nearest Ensembl: | ENSG00000276240 |
| Gene Name: | T cell receptor alpha variable 8-1 |
| Gene Alias: | OR4E1P |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.250000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB305700:19 AB749836:20 AB305750:-27 AB749884:-58 AB977223:-67 AB976956:-79 AB977143:82 X61075:83 AB305744:100 AB749822:-110 M13723:123 X04949:123 AB749902:153 S76587:366 AB977300:422 KX075744:424 KX075631:428 KX074556:428 KX075213:428 KX076669:428 KX076988:428 KX075667:428 KX074366:428 KX076604:428 KX076920:428 KX076903:428 KX076908:428 KX077007:428 KX077030:428 KX077075:428 KX076411:428 KX075414:430 KX075418:430 KX076875:474 KX075415:484 KX074969:490 KX075122:490 KX076129:490 KX074316:493 KX074821:493 KX076242:493 KX075605:493 KX075645:493 KX074646:496 KX074522:496 KX075711:496" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.