rfhg_163660.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2698739,EH38E1701831) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -216839 |
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| Nearest PromoterID: | NM_001317107 |
| Entrez ID: | 26687 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001317107 |
| Nearest Ensembl: | ENSG00000276240 |
| Gene Name: | T cell receptor alpha variable 12-2 |
| Gene Alias: | OR4E1P |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.428571 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB305705:-2 AB977156:4 AB749858:5 AB977189:10 AB976779:-17 AB977393:22 AB977356:23 AB977289:26 AB977226:26 AB977348:27 AB305679:29 AB977111:34 AB305739:35 AB976910:46 AB305703:52 AB360829:60 AF020651:69 S60781:81 M81774:96 DQ286431:99 GU122926:99 KT207830:99 X58746:102 AB977395:349 AB306021:369 AB977277:378 M17652:380 M17653:380 X04940:387 M27369:387 X04946:387 AF532850:395 AF532854:395 AF532847:395 AF532856:395 AF532838:395 AF532851:395 AF532837:395 AF532849:396 AY135844:396 EU340840:396 X92883:397 X92766:397 X92783:397 AF532842:397 AF532843:400 AF532852:400 AF532840:400 AF532839:400 AF532844:400 AY135853:400 AF532841:402 AF532845:402 AY135839:402 AY135835:402 AY135838:402 AY135843:402 AY135846:402 AY135842:402 AY135832:402 AY135836:402 AF532848:402 AF532853:402 AY135837:402 AY135851:402 AY135849:402 AY135833:402 AY135852:402 AY135841:402 AY135850:402 AY135840:404 AY135847:407 AB977137:407 AB977243:407 AB976957:407 AB976929:407 AB976867:407 AB977473:407 AB976827:407 AB976946:407 S82064:414 AY135834:415 AB305742:417 AY247836:420 KX074530:426 KX075470:426 KX075637:426 KX076175:426 KX076587:426 KX074975:426 KX076391:426 KX076457:426 KX076648:426 KX075747:426 KX076820:426 KX075854:426 KX076027:426 KX075082:426 KX074529:426 KX076558:426 KX074640:426 AF327017:429 S82066:438 KX074637:441 AY196320:443 KX077021:445 AY135848:446 KX076122:453 U40464:454 KX075797:466 KX076588:483 KX076111:483 KX074684:483 AF532846:486 AF020639:493" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.