rfhg_163667.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2698744,EH38E1701835) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -223420 |
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| Nearest PromoterID: | NM_001317107 |
| Entrez ID: | 26687 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001317107 |
| Nearest Ensembl: | ENSG00000276240 |
| Gene Name: | T cell receptor alpha constant; T cell receptor alpha variable 8-4 |
| Gene Alias: | OR4E1P |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.200000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB977066:8 AB305684:8 AB977318:-11 AB305738:16 AB977311:-24 AB305720:-43 AB977200:-43 AB749872:-44 M12423:-44 AB306118:-45 AB305685:-45 AB306106:-46 AK310091:-46 AB306019:-46 AB976896:-47 AB976912:-47 AB977044:-47 AB976887:-47 AB977003:-47 AB977041:-47 AB977049:-47 AB305652:-48 BC070364:-49 X63455:55 AB976777:-65 AB305697:66 AB305774:71 AB976958:-79 AB305757:102 AB977104:-109 AB977008:-110 AB305793:111 AB976805:-120 AB976741:-121 D13077:122 M17646:122 M27368:122 M17647:122 Z77830:122 AB305674:296 M17648:330 AB976807:331 AB976804:331 AB977164:331 AB977270:332 AB977074:332 AB976824:332 AB977199:332 AB977067:332 AB305724:383 M17665:397 AB977132:398 KX076294:428 KX076297:428 KX076398:428 KX076428:428 KX074552:428 KX075022:428 KX075571:428 KX076446:428 KX075926:428 KX074255:428 KX074652:428 KX075254:428 KX075746:428 KX076487:428 KX075616:428 KX076929:428 KX076689:428 KX075012:428 KX075564:428 KX076302:428 KX075112:429 KX074785:456 M17666:474 KX075952:476 KX076526:480 KM004193:481 KM004448:481 KM004451:481 KM004149:481 KM004421:481 KM004947:482 KM004939:482 KM004177:482 KM004291:482 KM004506:482 KM004891:482 KM004961:482 MG789448:483 MG790828:483 KM004408:483 KM004817:483 MG790442:483 MG789345:483 MG790767:483 KM004984:483 MG790727:483 MG790786:483 KM004062:483 KM004353:483 MG789362:483 MG789015:483 MG789722:483 MG789816:483 MG790983:483 MG791774:483 MG789413:483 KM004187:483 KM004443:483 MG790609:483 MG790221:483 MG788996:483 MG789176:483 MG789238:483 MG789302:483 MG789343:483 MG789397:483 MG789538:483 MG789539:483 MG789548:483 MG789550:483 MG789567:483 MG789572:483 MG789576:483 MG789590:483 MG789673:483 MG789712:483 MG789727:483 MG789748:483 MG789818:483 MG789928:483 MG789948:483 MG790038:483 MG790118:483 MG790173:483 MG790197:483 MG790204:483 MG790324:483 MG790347:483 MG790365:483 MG790443:483 MG790559:483 MG790683:483 MG790901:483 MG791131:483 KM004172:483 KM004204:483 KM004259:483 KM004435:483 KM004456:483 KM004488:483 KM004954:483 AB976991:485 KX074523:491 KX075441:491 KX076814:491 KX075277:491 KX074413:491 KX074801:491 KX076029:491 KX074365:491 KX074822:491 KX076077:491 KX076167:491 KX076431:491 KX076926:491 KX074671:491 KX074455:491 KX074779:491 KX074983:491 KX075348:491 KX075951:491 KX074521:491 KX076959:491 KX077176:491 KX076099:491 KX076698:491 KX075938:491 KX075974:491 KX075181:491 KX075661:491" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.