rfhg_16428.1

Basic information about the TSS

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TSS ID: rfhg_16428.1 Species: human Chr: chr1		Start: 179575925 End: 179575954 Strand: -
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2246108,EH38E1401520)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000367615.9:0 ENST00000367616.4:0 BC029141:0 AJ279254:0 GeneID: 7827 HGNC/MGI_ID: HGNC:13394 UniProt_ID: Q9NP85 Nearer transcript ids and distances: KJ901849:61 KJ905342:61 view more...

Gene_name: NPHS2 stomatin family member, podocin Gene_symbol: NPHS2 Gene_synonyms: PDCN SRN1 Gene_source: HGNC:13394

TATA-Box annotation

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Distance to TSS:	9
Nearest PromoterID:	NM_001297575
Entrez ID:	7827
Nearest Unigene:	Hs.412710
Nearest Refseq:	NM_014625
Nearest Ensembl:	ENSG00000116218
Gene Name:	NPHS2 stomatin family member, podocin
Gene Alias:	PDCN|SRN1
Gene Type:	protein-coding
CpG%:	0.137931
GC%:	0.733333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.