rfhg_164346.1

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Basic information about the TSS


TSS ID:rfhg_164346.1
Species:human
Chr:chr14
Start:23469683
End:23469715
Strand:+
Source datasetsPRJNA401781|PRJDB5282|PRJNA4843412|DRA013844|PRJNA548673
|PRJNA615891
ProtocolRAMPAGE|oligo_capping|C1CAGE|NETCAGE|CAGE|ReCappable-seq
|SLIC_CAGE|TIF-seq2
TSS cluster detected*10

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000556378.5:0
ENST00000557097.5:0
ENST00000553336.5:0
ENST00000408901.8:0
ENST00000397154.7:0
ENST00000553439.5:0
AK124318:0
AK291875:0
BC030817:0
AL050003:0
AK022215:0
GeneID:25983
HGNC/MGI_ID:HGNC:20271
UniProt_ID:Q8NEJ9
Nearer transcript ids and distances:
  • CU689028:1
  • EU832603:1
  • EU832521:1
  • ENST00000555128.5:29
  • ENST00000556953.1:48
  • ENST00000556483.5:335
view more...
Gene_name:neuroguidin
Gene_symbol:NGDN
Gene_synonyms:CANu1 DKFZP564O092 LCP5 NGD lpd-2
Gene_source:HGNC:20271



TATA-Box annotation


Distance to TSS:-4
Nearest PromoterID:NM_001042635
Entrez ID:25983
Nearest Unigene:Hs.9043
Nearest Refseq:NM_015514
Nearest Ensembl:ENSG00000129460
Gene Name:neuroguidin
Gene Alias:C14orf120|CANu1|LCP5|NGD|lpd-2
Gene Type:protein-coding
CpG%:0.093750
GC%:0.606061
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.