rfhg_165673.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_165673.1
TSS ID(Version3):hg_235190.1
Species:human
Chr:chr14
Start:49862837
End:49862859
Strand:-
Source datasetsDRA000914|RAMPAGE|PRJNA548673|PRJNA401781|PRJNA597322
ProtocolCAGE|RAMPAGE|STRIPE-seq|ReCappable-seq
TSS cluster detected*6

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2716228,EH38E1712367)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000490232.3:0
GeneID:378706
HGNC/MGI_ID:HGNC:23134
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000655317.1:-5
  • X02067:-50
  • ENST00000659240.1:-55
view more...
Gene_name:RNA component of signal recognition particle 7SL2
Gene_symbol:RN7SL2
Gene_synonyms:7L30.1 7SL1c RNSRP2
Gene_source:HGNC:23134



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NR_027260
Entrez ID:378706
Nearest Unigene:
Nearest Refseq:NR_027260
Nearest Ensembl:ENSG00000274012
Gene Name:RNA component of signal recognition particle 7SL2
Gene Alias:7L1C|7L30.1|7SL1c|RNSRP2
Gene Type:scRNA
CpG%:0.227273
GC%:0.826087
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.