rfhg_166254.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_166254.1
TSS ID(Version3):hg_143356.1
hg_143355.1
Species:human
Chr:chr14
Start:55103193
End:55103356
Strand:-
Source datasetsFANTOM5|PRJNA4843412|DRA013844|PRJDB5282
ProtocolCAGE|NETCAGE|C1CAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D2721013,EH38E1715901)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:MG828523:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-25978
    Nearest PromoterID:NM_001357678
    Entrez ID:3958
    Nearest Unigene:Hs.531081
    Nearest Refseq:NM_002306
    Nearest Ensembl:ENSG00000131981
    Gene Name:
    Gene Alias:CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2
    Gene Type:protein-coding
    CpG%:0.042945
    GC%:0.615854
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):