rfhg_172208.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2774556,EH38E1752314) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -118 |
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| Nearest PromoterID: | NM_001365088 |
| Entrez ID: | 9990 |
| Nearest Unigene: | Hs.510939 |
| Nearest Refseq: | NM_005135 |
| Nearest Ensembl: | ENSG00000140199 |
| Gene Name: | |
| Gene Alias: | ACCPN|KCC3|KCC3A|KCC3B |
| Gene Type: | protein-coding |
| CpG%: | 0.250000 |
| GC%: | 0.882353 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "ENST00000559664.5:105 BX648195:105 ENST00000354181.8:110 NM_001365088.1:110 NM_001042496.2:110 NM_001042494.2:110 AF531260:-126 ENST00000458406.6:131 ENST00000559523.5:131 LF383711:131 MA619288:131 ENST00000558589.5:134 AF477977:134 AF531259:134 BC051744:134 DQ138323:134 BC033894:135 ENST00000559484.1:149 ENST00000561080.5:-150 ENST00000558667.5:-150 ENST00000561120.5:-150 ENST00000559236.5:-150 NM_001042495.2:-150 BC051709:-150 AK292550:-150 BC070107:-152 ENST00000397702.6:-153 ENST00000676379.1:429 ENST00000675289.1:429" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.