rfhg_172211.1

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Basic information about the TSS


TSS ID:rfhg_172211.1
Species:human
Chr:chr15
Start:34342041
End:34342104
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2774562,EH38E1752320)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF348509:0
MA584086:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF348510:72
  • MA584087:72
  • LF348511:210
  • MA584088:210
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:1089
Nearest PromoterID:NM_018648
Entrez ID:55505
Nearest Unigene:Hs.14317
Nearest Refseq:NM_018648
Nearest Ensembl:ENSG00000182117
Gene Name:
Gene Alias:DKCB1|NOLA3|NOP10P
Gene Type:protein-coding
CpG%:0.031746
GC%:0.546875
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):