rfhg_172422.1

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Basic information about the TSS


TSS ID:rfhg_172422.1
Species:human
Chr:chr15
Start:38252161
End:38252171
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2777478,EH38E1754166)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF205836:-18
MA441413:-18
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK091222:144
  • BC137480:155
  • BC137481:155
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-670
Nearest PromoterID:NM_152594
Entrez ID:161742
Nearest Unigene:Hs.525781
Nearest Refseq:NM_152594
Nearest Ensembl:ENSG00000166068
Gene Name:
Gene Alias:LGSS|NFLS|PPP1R147|hSpred1|spred-1
Gene Type:protein-coding
CpG%:0.200000
GC%:0.909091
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):