rfhg_172991.1

Basic information about the TSS

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TSS ID: rfhg_172991.1 Species: human Chr: chr15		Start: 41544244 End: 41544277 Strand: -
Source datasets	PRJNA615891|PRJNA401781|PRJNA548673|PRJNA4843412|DRA013844 |PRJDB5282
Protocol	TIF-seq2|RAMPAGE|CAGE|ReCappable-seq|SLIC_CAGE|NETCAGE |C1CAGE
TSS cluster detected*	9

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2780732,EH38E1756675)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000304330.9:0 ENST00000561603.5:0 ENST00000562303.5:0 ENST00000567866.5:0 ENST00000566863.1:0 ENST00000569829.1:0 BC000246:0 AB037824:0 AK022794:0 AK290224:0 AK308884:0 GeneID: 26015 HGNC/MGI_ID: HGNC:24567 UniProt_ID: A8K2F9 H3BPM3 H3BPY8 H3BRE8 Q9BWH6 Nearer transcript ids and distances: LF205848:-5 MA441425:-5 view more...

Gene_name: RNA polymerase II associated protein 1 Gene_symbol: RPAP1 Gene_synonyms: DKFZP727M111 FLJ12732 KIAA1403 MGC858 Gene_source: HGNC:24567

TATA-Box annotation

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Distance to TSS:	-3
Nearest PromoterID:	NM_015540
Entrez ID:	26015
Nearest Unigene:	Hs.371045
Nearest Refseq:	NM_015540
Nearest Ensembl:	ENSG00000103932
Gene Name:	RNA polymerase II associated protein 1
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.151515
GC%:	0.676471
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.