rfhg_173310.1

Basic information about the TSS

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TSS ID: rfhg_173310.1 TSS ID(Version3): hg_146359.1 hg_235562.1 Species: human Chr: chr15		Start: 43800565 End: 43800636 Strand: +
Source datasets	FANTOM5|EPD|DBTSS|DRA000914|ENCODE|RAMPAGE|PRJNA615891 |PRJNA401781|PRJNA548673|PRJNA4843412|DRA013844|PRJNA597322 |PRJDB5282
Protocol	CAGE|TSS_database|TSS-seq|RAMPAGE|TIF-seq2|oligo_capping |ReCappable-seq|SLIC_CAGE|NETCAGE|STRIPE-seq|C1CAGE
TSS cluster detected*	17

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2782545,EH38E1757998)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000442995.4:0 ENST00000458412.2:0 ENST00000497142.2:0 AK022435:0 AF161485:0 AF049613:0 GeneID: 25764 HGNC/MGI_ID: HGNC:18418 UniProt_ID: J3QT56 Q9NX55 Nearer transcript ids and distances: BC019262:-142 NM_001199885.1:-144 LF349045:-199 MA584622:-199 ENST00000498605.1:-254 view more...

Gene_name: huntingtin interacting protein K Gene_symbol: HYPK Gene_synonyms: FLJ20431 HSPC136 Gene_source: HGNC:18418

TATA-Box annotation

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Distance to TSS:	179
Nearest PromoterID:	NM_001199885
Entrez ID:	25764
Nearest Unigene:	Hs.730672
Nearest Refseq:	NM_016400
Nearest Ensembl:	ENSG00000242028
Gene Name:	huntingtin interacting protein K
Gene Alias:	C15orf63|HSPC136
Gene Type:	protein-coding
CpG%:	0.112676
GC%:	0.625000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.