rfhg_173738.1

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Basic information about the TSS


TSS ID:rfhg_173738.1
Species:human
Chr:chr15
Start:48878232
End:48878241
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2786348,EH38E1760479)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AF274951:44
GeneID:
HGNC/MGI_ID:
UniProt_ID:Q9BZT5
Nearer transcript ids and distances:
  • AB527924:-55
  • KJ893442:-55
  • BC007944:-64
  • AL357456:-67
  • BC024151:-77
  • AL109701:-79
  • ENST00000560490.1:-96
  • AK098383:-96
  • ENST00000530028.3:-98
  • NM_014335.3:-98
  • AF349444:-109
  • AF109873:-118
  • AF092135:-118
  • AK315365:-123
  • BC114946:-131
  • BC114944:-131
  • AF274947:224
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:102
Nearest PromoterID:NM_014335
Entrez ID:23741
Nearest Unigene:Hs.255973
Nearest Refseq:NM_014335
Nearest Ensembl:ENSG00000255302
Gene Name:
Gene Alias:C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21
Gene Type:protein-coding
CpG%:0.000000
GC%:0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):