rfhg_17375.1

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Basic information about the TSS


TSS ID:rfhg_17375.1
Species:human
Chr:chr1
Start:190478312
End:190478337
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2254529,EH38E1407077)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:CR936711:-52
GeneID:101929120
HGNC/MGI_ID:HGNC:50577
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000436905.5:214
  • NR_110717.1:214
view more...
Gene_name:BRINP3 divergent transcript
Gene_symbol:BRINP3-DT
Gene_synonyms:
Gene_source:HGNC:50577



TATA-Box annotation


Distance to TSS:64
Nearest PromoterID:NR_110716
Entrez ID:101929120
Nearest Unigene:Hs.602301
Nearest Refseq:NR_110716
Nearest Ensembl:
Gene Name:BRINP3 divergent transcript
Gene Alias:-
Gene Type:ncRNA
CpG%:0.080000
GC%:0.576923
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.