rfhg_174195.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_174195.1
Species:human
Chr:chr15
Start:52678732
End:52678763
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2789490,EH38E1762778)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000534964.6:0
ENST00000399202.8:0
ENST00000562135.5:0
AK308049:0
GeneID:56204
HGNC/MGI_ID:HGNC:25609
UniProt_ID:H0Y3Q9 H3BUJ2 Q32MH5
Nearer transcript ids and distances:
  • BC040548:98
  • ENST00000261844.11:109
  • AK292917:109
  • AB037791:120
  • ENST00000562351.2:172
view more...
Gene_name:atos homolog A
Gene_symbol:ATOSA
Gene_synonyms:FLJ10980
Gene_source:HGNC:25609



TATA-Box annotation


Distance to TSS:-113
Nearest PromoterID:NR_104457
Entrez ID:56204
Nearest Unigene:Hs.152385
Nearest Refseq:NM_019600
Nearest Ensembl:ENSG00000047346
Gene Name:atos homolog A
Gene Alias:KIAA1370
Gene Type:protein-coding
CpG%:0.064516
GC%:0.656250
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.