rfhg_174200.1

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Basic information about the TSS


TSS ID:rfhg_174200.1
TSS ID(Version3):hg_150039.1
hg_150040.1
Species:human
Chr:chr15
Start:52679308
End:52679417
Strand:-
Source datasetsFANTOM5|DBTSS|PRJNA4843412|DRA013844
ProtocolCAGE|TSS-seq|NETCAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2789493,EH38E1762781)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000619572.5:0
ENST00000566768.5:0
ENST00000561543.5:0
GeneID:56204
HGNC/MGI_ID:HGNC:25609
UniProt_ID:H3BQ29 H3BTD0 Q32MH5
Nearer transcript ids and distances:
    Gene_name:atos homolog A
    Gene_symbol:ATOSA
    Gene_synonyms:FLJ10980
    Gene_source:HGNC:25609



    TATA-Box annotation


    Distance to TSS:-728
    Nearest PromoterID:NR_104457
    Entrez ID:56204
    Nearest Unigene:Hs.152385
    Nearest Refseq:NM_019600
    Nearest Ensembl:ENSG00000047346
    Gene Name:atos homolog A
    Gene Alias:KIAA1370
    Gene Type:protein-coding
    CpG%:0.055046
    GC%:0.609091
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.