rfhg_175417.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_175417.1
TSS ID(Version3):hg_235651.1
Species:human
Chr:chr15
Start:65304674
End:65304757
Strand:+
Source datasetsDRA000914|PRJNA401781|PRJNA548673
ProtocolCAGE|RAMPAGE|ReCappable-seq|oligo_capping
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2800365,EH38E1770610)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000363286.1:0
X04293:0
GeneID:26832
HGNC/MGI_ID:HGNC:10212
UniProt_ID:
Nearer transcript ids and distances:
  • M23824:17
Gene_name:RNA, U5B small nuclear 1
Gene_symbol:RNU5B-1
Gene_synonyms:U5B1
Gene_source:HGNC:10212



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NR_002757
Entrez ID:26832
Nearest Unigene:
Nearest Refseq:NR_002757
Nearest Ensembl:ENSG00000200156
Gene Name:RNA, U5B small nuclear 1
Gene Alias:RNU5B|RNU5B-1P|U5B1
Gene Type:snRNA
CpG%:0.036145
GC%:0.392857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.