rfhg_176459.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_176459.1
Species:human
Chr:chr15
Start:74461282
End:74461320
Strand:+
Source datasetsPRJDB5282|PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673
|PRJNA615891
ProtocolC1CAGE|NETCAGE|CAGE|RAMPAGE|oligo_capping|ReCappable-seq
|SLIC_CAGE
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2809920,EH38E1777703)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000664892.1:0
ENST00000567286.5:0
ENST00000666989.1:0
ENST00000659591.1:0
ENST00000564621.2:0
GeneID:440288
HGNC/MGI_ID:HGNC:48614
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000657781.1:-3
  • ENST00000564137.5:-17
  • ENST00000499217.6:-17
  • NR_120377.1:-17
  • NR_038449.1:-17
  • NR_038448.1:-17
  • BC014373:-17
  • ENST00000568853.1:24
  • AF085896:40
  • ENST00000670462.1:90
  • BC121819:281
view more...
Gene_name:UBL7 divergent transcript
Gene_symbol:UBL7-DT
Gene_synonyms:
Gene_source:HGNC:48614



TATA-Box annotation


Distance to TSS:36
Nearest PromoterID:NR_038449
Entrez ID:440288
Nearest Unigene:Hs.611046
Nearest Refseq:NR_038448
Nearest Ensembl:ENSG00000247240
Gene Name:UBL7 divergent transcript
Gene Alias:-
Gene Type:ncRNA
CpG%:0.078947
GC%:0.564103
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.