rfhg_177337.1
Basic information about the TSS
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| Source datasets | PRJNA401781|PRJNA615891|PRJNA4843412|DRA013844 | |||||||||||||
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| Protocol | CAGE|SLIC_CAGE|NETCAGE | |||||||||||||
| TSS cluster detected* | 4 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS,CTCF-bound (EH38D2817432,EH38E1782982) |
|---|---|
| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 436 |
|---|---|
| Nearest PromoterID: | NR_111944 |
| Entrez ID: | 6218 |
| Nearest Unigene: | Hs.433427 |
| Nearest Refseq: | NM_001021 |
| Nearest Ensembl: | ENSG00000182774 |
| Gene Name: | |
| Gene Alias: | DBA4|RPS17L|RPS17L1|RPS17L2|S17 |
| Gene Type: | protein-coding |
| CpG%: | 0.093023 |
| GC%: | 0.568182 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "KJ897506:-87 ENST00000561068.5:-88 BC049824:-89 KJ905912:-89 CU687068:-90 DQ893380:-90 DQ896701:-90 ENST00000560612.1:-99 ENST00000559776.1:-376 BC009407:-392 ENST00000558397.1:-394 BC020453:-396 BC019899:-397 BC071928:-400 AK026570:-407 M13932:-408 ENST00000560639.1:-409 AK311951:-409 BC070222:-410 ENST00000559273.1:-413 ENST00000647841.1:-414 ENST00000560229.6:-414 NM_001021.6:-414 NR_111943.2:-414 NR_111944.3:-414 BC022370:-414 ENST00000561157.5:-416 BC062715:-494" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.