rfhg_179315.1

Basic information about the TSS

TSS ID:	rfhg_179315.1
Species:	human
Chr:	chr16

Start:	684319
End:	684362
Strand:	-

Source datasets

PRJNA615891|PRJNA548673|PRJNA401781|PRJNA4843412|DRA013844

Protocol

TIF-seq2|SLIC_CAGE|ReCappable-seq|CAGE|NETCAGE

TSS cluster detected^*

7

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2835040,EH38E1794980)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000609261.6:0 ENST00000565302.5:0 ENST00000568689.5:0 ENST00000569441.5:0 ENST00000562111.1:0 ENST00000569396.5:0 AF370420:0 BC073785:0 DQ074695:0
GeneID:	339123
HGNC/MGI_ID:	HGNC:14148
UniProt_ID:	H3BVG3 Q96S16
Nearer transcript ids and distances:	ENST00000562824.5:-1 ENST00000566199.1:5 ENST00000567901.1:16 BC137101:-43 BC137100:-43 LF210746:-111 MA446323:-111 ENST00000563088.5:164 ENST00000567120.5:-166 ENST00000570037.5:218 view more...

Gene_name:	jumonji domain containing 8
Gene_symbol:	JMJD8
Gene_synonyms:
Gene_source:	HGNC:14148

TATA-Box annotation

Distance to TSS:	-6
Nearest PromoterID:	NM_001323920
Entrez ID:	339123
Nearest Unigene:	Hs.533771
Nearest Refseq:	NM_001005920
Nearest Ensembl:	ENSG00000161999
Gene Name:	jumonji domain containing 8
Gene Alias:	C16orf20\|PP14397
Gene Type:	protein-coding
CpG%:	0.116279
GC%:	0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.