rfhg_179748.1

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Basic information about the TSS


TSS ID:rfhg_179748.1
Species:human
Chr:chr16
Start:2029070
End:2029080
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000563587.5:447
GeneID:9351
HGNC/MGI_ID:HGNC:11076
UniProt_ID:H3BQS0
Nearer transcript ids and distances:
    Gene_name:NHERF family PDZ scaffold protein 2
    Gene_symbol:NHERF2
    Gene_synonyms:E3KARP NHERF-2 OCTS2 SIP-1 TKA-1
    Gene_source:HGNC:11076



    TATA-Box annotation


    Distance to TSS:2173
    Nearest PromoterID:NM_004785
    Entrez ID:9351
    Nearest Unigene:Hs.440896
    Nearest Refseq:NM_004785
    Nearest Ensembl:ENSG00000065054
    Gene Name:NHERF family PDZ scaffold protein 2
    Gene Alias:E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.545455
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.