rfhg_179789.1

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Basic information about the TSS


TSS ID:rfhg_179789.1
TSS ID(Version3):hg_155906.1
Species:human
Chr:chr16
Start:2155351
End:2155362
Strand:-
Source datasetsFANTOM5|DBTSS|DRA000914|ENCODE|PRJNA615891|PRJNA401781
|PRJNA548673|PRJNA4843412|DRA013844
ProtocolCAGE|TSS-seq|TIF-seq2|oligo_capping|SLIC_CAGE
|ReCappable-seq|RAMPAGE|NETCAGE
TSS cluster detected*13

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000563192.1:0
GeneID:100507303
HGNC/MGI_ID:HGNC:49574
UniProt_ID:
Nearer transcript ids and distances:
  • LF340706:168
  • MA576283:168
  • NR_002736.1:246
view more...
Gene_name:small nucleolar RNA host gene 19
Gene_symbol:SNHG19
Gene_synonyms:SNORD60HG
Gene_source:HGNC:49574



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NR_132114
Entrez ID:100507303
Nearest Unigene:Hs.369728
Nearest Refseq:NR_132114
Nearest Ensembl:ENSG00000260260
Gene Name:small nucleolar RNA host gene 19
Gene Alias:SNORD60HG
Gene Type:ncRNA
CpG%:0.090909
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.