rfhg_180963.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_180963.1
Species:human
Chr:chr16
Start:11345282
End:11345288
Strand:-
Source datasetsPRJNA401781
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2844818,EH38E1801784)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_135174.1:70
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000572913.1:71
  • ENST00000572706.1:85
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-73
Nearest PromoterID:NR_135174
Entrez ID:105371083
Nearest Unigene:Hs.737495
Nearest Refseq:NR_135174
Nearest Ensembl:ENSG00000263080
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.142857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):