rfhg_181097.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_181097.1
Species:human
Chr:chr16
Start:11977799
End:11977810
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2845511,EH38E1802362)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000570197.1:-40
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:1070
    Nearest PromoterID:NM_032167
    Entrez ID:92017
    Nearest Unigene:Hs.458401
    Nearest Refseq:NM_032167
    Nearest Ensembl:ENSG00000048471
    Gene Name:
    Gene Alias:A-388D4.1|RUNDC2A
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.416667
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):