rfhg_181997.1
Basic information about the TSS
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| Source datasets | PRJNA548673 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2852532,EH38E1807291) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -219 |
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| Nearest PromoterID: | NM_001258035 |
| Entrez ID: | 55718 |
| Nearest Unigene: | Hs.460298 |
| Nearest Refseq: | NM_018119 |
| Nearest Ensembl: | ENSG00000058600 |
| Gene Name: | RNA polymerase III subunit E |
| Gene Alias: | RPC5|SIN |
| Gene Type: | protein-coding |
| CpG%: | 0.085106 |
| GC%: | 0.645833 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000299853.10:229 NM_001258035.2:229 NM_001258034.2:229 NM_001258036.2:229 NM_001258033.2:229 NM_018119.4:229 NR_047581.2:229 AK026645:229 ENST00000564209.5:231 AK300735:231 ENST00000565358.5:240 AK023160:240 AK023231:243 ENST00000418581.6:247 AK296813:247 AK222789:249 ENST00000564883.5:250 ENST00000359210.8:253 BC000285:253 ENST00000561494.5:254 ENST00000563024.5:254 AK001371:254 AK222671:254 ENST00000564061.5:275 AB040885:275" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.