rfhg_181998.1

Basic information about the TSS

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TSS ID: rfhg_181998.1 Species: human Chr: chr16		Start: 22297397 End: 22297443 Strand: +
Source datasets	PRJNA597322|PRJNA401781|PRJNA4843412|DRA013844|PRJNA615891 |PRJNA548673|PRJDB5282
Protocol	STRIPE-seq|CAGE|oligo_capping|NETCAGE|SLIC_CAGE|C1CAGE |ReCappable-seq|TIF-seq2|RAMPAGE
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2852532,EH38E1807291)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000299853.10:0 ENST00000564209.5:0 ENST00000565358.5:0 ENST00000418581.6:0 ENST00000564883.5:0 ENST00000359210.8:0 ENST00000561494.5:0 ENST00000563024.5:0 AK026645:0 AK300735:0 AK023160:0 AK023231:0 AK296813:0 AK222789:0 BC000285:0 AK001371:0 AK222671:0 GeneID: 55718 HGNC/MGI_ID: HGNC:30347 UniProt_ID: H3BMR4 H3BRY1 H3BSI5 H3BSM3 Q53GZ2 Q9NVU0 Nearer transcript ids and distances: ENST00000564061.5:12 AB040885:12 ENST00000615879.4:-22 view more...

Gene_name: RNA polymerase III subunit E Gene_symbol: POLR3E Gene_synonyms: C37 FLJ10509 RPC5 SIN Gene_source: HGNC:30347

TATA-Box annotation

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Distance to TSS:	11
Nearest PromoterID:	NM_018119
Entrez ID:	55718
Nearest Unigene:	Hs.460298
Nearest Refseq:	NM_018119
Nearest Ensembl:	ENSG00000058600
Gene Name:	RNA polymerase III subunit E
Gene Alias:	RPC5|SIN
Gene Type:	protein-coding
CpG%:	0.086957
GC%:	0.680851
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.