rfhg_182579.1
Basic information about the TSS
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| Source datasets | PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673|PRJNA615891 | |||||||||||||
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| Protocol | NETCAGE|CAGE|RAMPAGE|ReCappable-seq|SLIC_CAGE|TIF-seq2 | |||||||||||||
| TSS cluster detected* | 8 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2857296,EH38E1810445) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NM_032815 |
| Entrez ID: | 84901 |
| Nearest Unigene: | Hs.513470 |
| Nearest Refseq: | NM_032815 |
| Nearest Ensembl: | ENSG00000176953 |
| Gene Name: | nuclear factor of activated T cells 2 interacting protein |
| Gene Alias: | ESC2|NIP45|RAD60 |
| Gene Type: | protein-coding |
| CpG%: | 0.064516 |
| GC%: | 0.593750 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000320805.8:-46 NM_001394786.1:-46 NM_001394784.1:-46 NM_001394785.1:-46 NM_032815.4:-46 NR_172207.1:-46 BC101741:-46 BC112182:-46 LF369926:-146 MA605503:-146 ENST00000564978.5:-176 BC068007:-176 LF369925:205 MA605502:205 BC080628:316 LF207893:-332 MA443470:-332" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.