rfhg_182581.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_182581.1
Species:human
Chr:chr16
Start:28962305
End:28962330
Strand:+
Source datasetsPRJNA4843412
ProtocolNETCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK094764:359
GeneID:84901
HGNC/MGI_ID:HGNC:25906
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:nuclear factor of activated T cells 2 interacting protein
    Gene_symbol:NFATC2IP
    Gene_synonyms:ESC2 FLJ14639 NIP45 RAD60
    Gene_source:HGNC:25906



    TATA-Box annotation


    Distance to TSS:3734
    Nearest PromoterID:NR_039742
    Entrez ID:100616487
    Nearest Unigene:
    Nearest Refseq:NR_039742
    Nearest Ensembl:ENSG00000284541
    Gene Name:nuclear factor of activated T cells 2 interacting protein
    Gene Alias:mir-4517
    Gene Type:ncRNA
    CpG%:0.000000
    GC%:0.461538
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.