rfhg_182927.1

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Basic information about the TSS


TSS ID:rfhg_182927.1
Species:human
Chr:chr16
Start:30113529
End:30113546
Strand:-
Source datasetsPRJNA615891
ProtocolTIF-seq2
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2858320,EH38E1811219)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000360688.3:0
ENST00000406256.8:0
AK026256:0
AK225450:0
GeneID:79153
HGNC/MGI_ID:HGNC:28638
UniProt_ID:Q7L5L3
Nearer transcript ids and distances:
  • BC002714:-11
  • LF384297:-11
  • MA619874:-11
  • Z36775:20
view more...
Gene_name:glycerophosphodiester phosphodiesterase domain containing 3
Gene_symbol:GDPD3
Gene_synonyms:MGC4171
Gene_source:HGNC:28638



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_024307
Entrez ID:79153
Nearest Unigene:Hs.289015
Nearest Refseq:NM_024307
Nearest Ensembl:ENSG00000102886
Gene Name:glycerophosphodiester phosphodiesterase domain containing 3
Gene Alias:GDE7
Gene Type:protein-coding
CpG%:0.000000
GC%:0.611111
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.