rfhg_18532.1

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Basic information about the TSS


TSS ID:rfhg_18532.1
Species:human
Chr:chr1
Start:204276828
End:204276848
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2265216,EH38E1414286)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000659404.1:53
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000654944.1:156
  • ENST00000437919.1:157
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-62850
Nearest PromoterID:NM_198447
Entrez ID:127845
Nearest Unigene:Hs.532401
Nearest Refseq:NM_198447
Nearest Ensembl:ENSG00000174567
Gene Name:
Gene Alias:CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b
Gene Type:protein-coding
CpG%:0.000000
GC%:0.523810
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):