rfhg_186108.1

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Basic information about the TSS


TSS ID:rfhg_186108.1
Species:human
Chr:chr16
Start:71808516
End:71808523
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2880651,EH38E1826012)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000683775.1:-77
GeneID:342371
HGNC/MGI_ID:HGNC:33279
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:ataxin 1 like
    Gene_symbol:ATXN1L
    Gene_synonyms:BOAT1
    Gene_source:HGNC:33279



    TATA-Box annotation


    Distance to TSS:315
    Nearest PromoterID:NM_001128
    Entrez ID:164
    Nearest Unigene:Hs.461253
    Nearest Refseq:NM_001128
    Nearest Ensembl:ENSG00000166747
    Gene Name:ataxin 1 like
    Gene Alias:ADTG|CLAPG1
    Gene Type:protein-coding
    CpG%:0.142857
    GC%:0.625000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.