rfhg_186120.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_186120.1
Species:human
Chr:chr16
Start:71851926
End:71852055
Strand:+
Source datasetsPRJNA597322
ProtocolSTRIPE-seq
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BX537596:-169
GeneID:342371
HGNC/MGI_ID:HGNC:33279
UniProt_ID:
Nearer transcript ids and distances:
  • BX537575:-296
Gene_name:ataxin 1 like
Gene_symbol:ATXN1L
Gene_synonyms:BOAT1
Gene_source:HGNC:33279



TATA-Box annotation


Distance to TSS:6014
Nearest PromoterID:NM_001137675
Entrez ID:342371
Nearest Unigene:Hs.743239
Nearest Refseq:NM_001137675
Nearest Ensembl:ENSG00000224470
Gene Name:ataxin 1 like
Gene Alias:BOAT|BOAT1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.584615
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.