rfhg_187220.1

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Basic information about the TSS


TSS ID:rfhg_187220.1
Species:human
Chr:chr16
Start:86223062
End:86223081
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2893990,EH38E1835162)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000667546.1:0
GeneID:
HGNC/MGI_ID:HGNC:49124
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:long intergenic non-protein coding RNA 1081
    Gene_symbol:LINC01081
    Gene_synonyms:TCONS_00024764
    Gene_source:HGNC:49124



    TATA-Box annotation


    Distance to TSS:26890
    Nearest PromoterID:NR_103859
    Entrez ID:100506542
    Nearest Unigene:Hs.111902
    Nearest Refseq:NR_103859
    Nearest Ensembl:ENSG00000269186
    Gene Name:long intergenic non-protein coding RNA 1081
    Gene Alias:TCONS_00024492
    Gene Type:ncRNA
    CpG%:0.052632
    GC%:0.600000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.