rfhg_188397.1

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Basic information about the TSS


TSS ID:rfhg_188397.1
Species:human
Chr:chr17
Start:3576651
End:3576653
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AF235160:-499
GeneID:7442
HGNC/MGI_ID:HGNC:12716
UniProt_ID:Q8IZY9
Nearer transcript ids and distances:
    Gene_name:transient receptor potential cation channel subfamily V member 1
    Gene_symbol:TRPV1
    Gene_synonyms:
    Gene_source:HGNC:12716



    TATA-Box annotation


    Distance to TSS:16225
    Nearest PromoterID:NM_080706
    Entrez ID:7442
    Nearest Unigene:Hs.579217
    Nearest Refseq:NM_018727
    Nearest Ensembl:ENSG00000196689
    Gene Name:transient receptor potential cation channel subfamily V member 1
    Gene Alias:VR1
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.666667
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.