rfhg_189304.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_189304.1
Species:human
Chr:chr17
Start:7549212
End:7549221
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2906026,EH38E1844470)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:JF432764:-59
GeneID:8742
HGNC/MGI_ID:HGNC:11927
UniProt_ID:
Nearer transcript ids and distances:
  • KJ897899:-60
  • BC156811:-64
  • AF030099:-75
  • BC104420:-90
  • ENST00000293826.4:-113
  • AY081051:-113
  • AF055872:-115
  • AY358870:-115
  • BC071837:-137
  • ENST00000293825.11:-154
  • ENST00000322272.11:-154
  • NM_003809.3:-154
  • NR_037146.2:-154
  • NM_172089.4:-154
  • BC019047:-154
  • ENST00000462619.5:204
  • ENST00000650738.1:248
view more...
Gene_name:TNF superfamily member 12
Gene_symbol:TNFSF12
Gene_synonyms:APO3L DR3LG TWEAK
Gene_source:HGNC:11927



TATA-Box annotation


Distance to TSS:158
Nearest PromoterID:NR_037146
Entrez ID:8742
Nearest Unigene:Hs.54673
Nearest Refseq:NM_003809
Nearest Ensembl:ENSG00000239697
Gene Name:TNF superfamily member 12
Gene Alias:APO3L|DR3LG|TNLG4A|TWEAK
Gene Type:protein-coding
CpG%:0.000000
GC%:0.700000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "KJ897899:-60 BC156811:-64 AF030099:-75 BC104420:-90 ENST00000293826.4:-113 AY081051:-113 AF055872:-115 AY358870:-115 BC071837:-137 ENST00000293825.11:-154 ENST00000322272.11:-154 NM_003809.3:-154 NR_037146.2:-154 NM_172089.4:-154 BC019047:-154 ENST00000462619.5:204 ENST00000650738.1:248" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.