rfhg_189368.1

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Basic information about the TSS


TSS ID:rfhg_189368.1
TSS ID(Version3):hg_159281.1
Species:human
Chr:chr17
Start:7583812
End:7583863
Strand:+
Source datasetsFANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJNA401781|PRJNA548673
|PRJNA615891|PRJDB5282|PRJNA4843412|DRA013844
ProtocolCAGE|TSS_database|TSS-seq|oligo_capping|ReCappable-seq
|SLIC_CAGE|TIF-seq2|C1CAGE|NETCAGE|RAMPAGE
TSS cluster detected*15

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2906081,EH38E1844523)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENST00000571822.5 ENST00000396501.8 ENST00000571391.5 ENST00000578267.5 ENST00000585188.5 ENST00000359822.10 ENST00000580708.5 ENST00000580834.5 ENST00000572836.5 ENST00000577088.5 ENST00000250124.11 ENST00000584378.5 ENST00000423172.6 ENST00000576066.5 ENST00000584479.5 ENST00000572719.5 ENST00000579445.5 BC001898 AK225401 AK075299 AF038961 AK027742 AK297691 AK314527 AK297001 AK225432 AK055923 AK300083 AK300140 CU674920 HQ448685 KR709838 KR709839 KR709840 KU178478 KU178479 KU178480 DQ499597
Distance:0
GeneID:9526
HGNC/MGI_ID:HGNC:7207
UniProt_ID:A0A0S2Z4T4 A0A0S2Z4W8 B2RB74 B4DTB4 I3L1D2 I3L295 I3L4E0 J3KT75 J3QRD5 J3QS48 J3QW43 O75352 Q1HDL3 Q96K24 Q96N63
Gene_name:MPDU1
Gene_symbol:MPDU1
Gene_synonyms:CDGIf Lec35 PQLC5 SL15 SLC66A5
Gene_source:HGNC:7207



TATA-Box annotation


Distance to TSS:-15
Nearest PromoterID:NM_004870
Entrez ID:9526
Nearest Unigene:Hs.246381
Nearest Refseq:NM_004870
Nearest Ensembl:ENSG00000129255
Gene Name:MPDU1
Gene Alias:CDGIF|HBEBP2BPA|Lec35|My008|PP3958|PQLC5|SL15|SLC66A5
Gene Description:mannose-P-dolichol utilization defect 1
Gene Type:protein-coding
CpG%:0.058824
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.