rfhg_190373.1

Basic information about the TSS

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TSS ID: rfhg_190373.1 Species: human Chr: chr17		Start: 16217199 End: 16217232 Strand: +
Source datasets	PRJDB5282|PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673 |PRJNA615891|PRJNA597322
Protocol	C1CAGE|NETCAGE|CAGE|oligo_capping|RAMPAGE|ReCappable-seq |SLIC_CAGE|TIF-seq2|STRIPE-seq
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2913187,EH38E1849238)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000581006.5:0 ENST00000584797.5:0 ENST00000498772.6:0 ENST00000225609.10:0 ENST00000395844.8:0 ENST00000470116.2:0 ENST00000585034.5:0 ENST00000477745.5:0 AK302523:0 AK292932:0 AK296120:0 BC068197:0 AB017165:0 CU686621:0 GeneID: 9487 HGNC/MGI_ID: HGNC:8966 UniProt_ID: A8MTV0 B4DJK6 J3KSD1 J3QLG8 J3QQI7 Q9Y2B2 Nearer transcript ids and distances: LF384749:-4 MA620326:-4 ENST00000489009.1:5 ENST00000607144.4:-8 ENST00000463810.2:14 view more...

Gene_name: phosphatidylinositol glycan anchor biosynthesis class L Gene_symbol: PIGL Gene_synonyms: PIG-L Gene_source: HGNC:8966

TATA-Box annotation

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Distance to TSS:	5
Nearest PromoterID:	NM_004278
Entrez ID:	9487
Nearest Unigene:	Hs.499793
Nearest Refseq:	NM_004278
Nearest Ensembl:	ENSG00000108474
Gene Name:	phosphatidylinositol glycan anchor biosynthesis class L
Gene Alias:	CHIME
Gene Type:	protein-coding
CpG%:	0.030303
GC%:	0.558824
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.