rfhg_191142.1

Basic information about the TSS

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TSS ID: rfhg_191142.1 Species: human Chr: chr17		Start: 27893341 End: 27893372 Strand: -
Source datasets	PRJNA615891|PRJNA401781|PRJNA4843412|PRJNA548673|DRA013844
Protocol	SLIC_CAGE|CAGE|oligo_capping|NETCAGE|ReCappable-seq
TSS cluster detected*	7

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2919116,EH38E1853539)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000460380.6:0 ENST00000379102.8:0 AK055808:0 GeneID: 201229 HGNC/MGI_ID: HGNC:27314 UniProt_ID: A8MSI8 D6RAR2 Nearer transcript ids and distances: ENST00000508862.5:-11

Gene_name: LYR motif containing 9 Gene_symbol: LYRM9 Gene_synonyms: HSD24 Gene_source: HGNC:27314

TATA-Box annotation

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Distance to TSS:	9
Nearest PromoterID:	NM_001076680
Entrez ID:	201229
Nearest Unigene:	Hs.687951
Nearest Refseq:	NM_001076680
Nearest Ensembl:	ENSG00000232859
Gene Name:	LYR motif containing 9
Gene Alias:	C17orf108|HSD24
Gene Type:	protein-coding
CpG%:	0.290323
GC%:	0.843750
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.