rfhg_191317.1

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Basic information about the TSS


TSS ID:rfhg_191317.1
TSS ID(Version3):hg_165050.1
Species:human
Chr:chr17
Start:28645107
End:28645183
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJNA4843412|DRA013844|PRJNA548673
|PRJNA401781|PRJNA615891|PRJDB5282
ProtocolCAGE|TSS_database|NETCAGE|ReCappable-seq|SLIC_CAGE|C1CAGE
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2919867,EH38E1854115)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000528896.7:0
ENST00000580882.5:0
ENST00000577417.5:0
ENST00000583403.5:0
CR933634:0
D43947:0
AK130007:0
BC050440:0
BC048096:0
AK307216:0
AB621823:0
GeneID:9703
HGNC/MGI_ID:HGNC:28960
UniProt_ID:G1UI35 J3QLM5 Q14667
Nearer transcript ids and distances:
  • AB384436:51
  • ENST00000544884.5:-271
  • ENST00000389003.7:-271
  • BC120873:-271
view more...
Gene_name:bridge-like lipid transfer protein family member 2
Gene_symbol:BLTP2
Gene_synonyms:BCOX BCOX1 CT101 DKFZp686M0843 FMP27 Hob MGC111488
Gene_source:HGNC:28960



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:NM_001321560
Entrez ID:9703
Nearest Unigene:Hs.151761
Nearest Refseq:NM_014680
Nearest Ensembl:ENSG00000007202
Gene Name:bridge-like lipid transfer protein family member 2
Gene Alias:BCOX|BCOX1|CT101|FMP27
Gene Type:protein-coding
CpG%:0.210526
GC%:0.779221
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.