rfhg_191665.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_191665.1
Species:human
Chr:chr17
Start:30971016
End:30971072
Strand:+
Source datasetsPRJNA4843412|DRA013844
ProtocolNETCAGE|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2922068,EH38E1855827)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000324689.8:0
ENST00000328381.10:0
ENST00000535306.6:0
AJ496729:0
BC005084:0
AK226030:0
BC082262:0
AK312979:0
AK122646:0
AK122709:0
GeneID:84282
HGNC/MGI_ID:HGNC:21158
UniProt_ID:B3KV69 Q8IUD6
Nearer transcript ids and distances:
  • AB470605:2
  • AY598332:2
  • ENST00000443677.6:-32
  • BC126420:-32
  • BC126422:-32
  • BC144143:-32
  • ENST00000580444.2:69
view more...
Gene_name:ring finger protein 135
Gene_symbol:RNF135
Gene_synonyms:MGC13061
Gene_source:HGNC:21158



TATA-Box annotation


Distance to TSS:5
Nearest PromoterID:NM_001184992
Entrez ID:84282
Nearest Unigene:Hs.29874
Nearest Refseq:NM_032322
Nearest Ensembl:ENSG00000181481
Gene Name:ring finger protein 135
Gene Alias:L13|MMFD|REUL|Riplet
Gene Type:protein-coding
CpG%:0.142857
GC%:0.771930
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.