rfhg_192025.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS (EH38D2924966,EH38E1857742) |
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| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 283 |
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| Nearest PromoterID: | NM_002982 |
| Entrez ID: | 6347 |
| Nearest Unigene: | Hs.303649 |
| Nearest Refseq: | NM_002982 |
| Nearest Ensembl: | ENSG00000108691 |
| Gene Name: | C-C motif chemokine ligand 2 |
| Gene Alias: | GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.564103 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AB463485:-200 KJ892101:-201 KJ905313:-201 DQ893725:-206 EU176175:-206 S69738:-230 M28226:-245 X14768:-252 S71513:-252 BC009716:-255 ENST00000580907.5:-264 ENST00000225831.4:-264 NM_002982.4:-264 AK311308:-264 AK311960:-264 LP880256:-268 LP882087:-268 LQ878889:-268 M24545:-268 MB143804:-268 MB423127:-268 LX148401:-270 LP764922:-272 LF209225:-274 MA444802:-274 ENST00000624362.1:-331" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.