rfhg_192501.1

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Basic information about the TSS


TSS ID:rfhg_192501.1
Species:human
Chr:chr17
Start:37745363
End:37745373
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2927870,EH38E1859772)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF327055:130
MA562632:130
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF209236:-162
  • MA444813:-162
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-309
Nearest PromoterID:NM_000458
Entrez ID:6928
Nearest Unigene:Hs.191144
Nearest Refseq:NM_000458
Nearest Ensembl:ENSG00000275410
Gene Name:
Gene Alias:FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.454545
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):