rfhg_193296.1

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Basic information about the TSS


TSS ID:rfhg_193296.1
Species:human
Chr:chr17
Start:40819656
End:40819676
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2930884,EH38E1862167)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF383445:-27
MA619022:-27
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF327740:-343
  • MA563317:-343
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:481
Nearest PromoterID:NR_160886
Entrez ID:147184
Nearest Unigene:Hs.353163
Nearest Refseq:NM_145274
Nearest Ensembl:ENSG00000167920
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.476190
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):